PXD034795

PXD034795 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	ABRF iPRG2020 Metaproteomics Study Data
Description	Replicate metaproteomic datasets containing four bacterial species and one bacteriophage.
HostingRepository	PRIDE
AnnounceDate	2024-01-26
AnnouncementXML	Submission_2024-01-26_06:02:12.047.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD034795
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Magnus Palmblad
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Salmonella enterica; NCBI TaxID: NCBITaxon:28901; scientific name: Bacteria; NCBI TaxID: NCBITaxon:2; scientific name: Bacillus subtilis; NCBI TaxID: 1423; scientific name: Escherichia phage T4; NCBI TaxID: 2681598;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-06-21 08:23:47	ID requested
⏵ 1	2024-01-26 06:02:12	announced

Publication List

10.6019/PXD034795;
Jagtap PD, Hoopmann MR, Neely BA, Harvey A, K, ä, ll L, Perez-Riverol Y, Abajorga MK, Thomas JA, Weintraub ST, Palmblad M, The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020). J Biomol Tech, 34(3):(2023) [pubmed]
10.7171/3fc1f5fe.a058bad4;

10.6019/PXD034795;

Jagtap PD, Hoopmann MR, Neely BA, Harvey A, K, ä, ll L, Perez-Riverol Y, Abajorga MK, Thomas JA, Weintraub ST, Palmblad M, The Association of Biomolecular Resource Facilities Proteome Informatics Research Group Study on Metaproteomics (iPRG-2020). J Biomol Tech, 34(3):(2023) [pubmed]

10.7171/3fc1f5fe.a058bad4;

Keyword List

submitter keyword: iPRG2020, phage, bacteriophage, bacteria,ABRF, iPRG, metaproteomics

submitter keyword: iPRG2020, phage, bacteriophage, bacteria,ABRF, iPRG, metaproteomics

Contact List

Magnus Palmblad
contact affiliation	Leiden University Medical Center
contact email	n.m.palmblad@lumc.nl
lab head
Magnus Palmblad
contact affiliation	Center for Proteomics and Metabolomics
contact email	n.m.palmblad@lumc.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD034795
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/01/PXD034795

PRIDE project URI

Repository Record List

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