PXD034563

PXD034563 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	O-linked and N-linked analysis of PTP69D (Drosophila melanogaster)
Description	Identifying N-linked and O-linked sites of glycosylation on PTP69D (Drosophila melanogaster) by sHCD and CID neutral loss-trigged MS3.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:17:22.168.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Robert Bridger
SpeciesList	scientific name: Drosophila melanogaster (Fruit fly); NCBI TaxID: 7227;
ModificationList	methylthiolated residue; monohydroxylated residue; O-glycosylated residue; Hex-HexNAc; deamidated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-06-16 02:22:58	ID requested
1	2023-03-10 19:13:41	announced
⏵ 2	2023-11-14 08:17:24	announced	2023-11-14: Updated project metadata.

Publication List

Monagas-Valentin P, Bridger R, Chandel I, Koff M, Novikov B, Schroeder P, Wells L, Panin V, Protein tyrosine phosphatase 69D is a substrate of protein O-mannosyltransferases 1-2 that is required for the wiring of sensory axons in Drosophila. J Biol Chem, 299(3):102890(2023) [pubmed]

Monagas-Valentin P, Bridger R, Chandel I, Koff M, Novikov B, Schroeder P, Wells L, Panin V, Protein tyrosine phosphatase 69D is a substrate of protein O-mannosyltransferases 1-2 that is required for the wiring of sensory axons in Drosophila. J Biol Chem, 299(3):102890(2023) [pubmed]

Keyword List

submitter keyword: glycopeptide, CID pseudo-neutral loss triggered MS3,O-mannose, sHCD

submitter keyword: glycopeptide, CID pseudo-neutral loss triggered MS3,O-mannose, sHCD

Contact List

Robert Bridger
contact affiliation	CCRC - UGA
contact email	rlbridger@ccrc.uga.edu
lab head
Robert Bridger
contact affiliation	CCRC - UGA
contact email	rlbridger@ccrc.uga.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD034563
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD034563

PRIDE project URI

Repository Record List

[ + ]