PXD034365 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Model Bacteria Physiological Studies Dataset 1: Triplicate replete proteomes for Ruergeria pomeroyi DSS-3 Dataset 2: Triplicate replete proteomes for Alteromonas macleodii MIT1002 |
Description | These datasets represent the global proteome of biological triplicates of replete cultures of Ruergeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 (three samples each). These datasets are an initial examination of the proteome allocation of these two heterotrophic bacteria. 2341 and 2075 proteins were identified in DSS-3 and MIT1002, respectively. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-07 |
AnnouncementXML | Submission_2024-10-07_11:05:55.344.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD034365 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Matthew McIlvin |
SpeciesList | scientific name: Bacteria; NCBI TaxID: NCBITaxon:2; scientific name: Alteromonas macleodii; NCBI TaxID: 28108; |
ModificationList | acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-06-06 03:10:14 | ID requested | |
⏵ 1 | 2024-10-07 11:05:55 | announced | |
Publication List
Keyword List
submitter keyword: CCOMP, Alteromonas macleodii MIT1002,Ruergeria pomeroyi DSS-3 |
Contact List
Mak Saito |
contact affiliation | Marine Chemistry and Geochemistry Woods Hole Oceanographic Institution |
contact email | msaito@whoi.edu |
lab head | |
Matthew McIlvin |
contact affiliation | Woods Hole Oceanographic Inst. |
contact email | mmcilvin@whoi.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD034365 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD034365
- Label: PRIDE project
- Name: Model Bacteria Physiological Studies Dataset 1: Triplicate replete proteomes for Ruergeria pomeroyi DSS-3 Dataset 2: Triplicate replete proteomes for Alteromonas macleodii MIT1002