PXD034227

PXD034227 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Ultra-fast proteome analysis of HEK293T cells using Q-Orbitrap MS
Description	We established an ultrafast proteomic method based on a 5-min gradient LC and quadrupole-Orbitrap mass spectrometer.
HostingRepository	jPOST
AnnounceDate	2022-07-28
AnnouncementXML	Submission_2023-01-03_22:57:37.400.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Masaki Ishikawa
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
Instrument	instrument

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-05-31 00:07:05	ID requested
1	2022-07-28 01:09:23	announced
2	2022-09-18 02:21:05	announced	2022-09-18: Updated FTP location.
⏵ 3	2023-01-03 22:57:38	announced	2023-01-04: Updated PubMed.

Publication List

Ishikawa M, Konno R, Nakajima D, Gotoh M, Fukasawa K, Sato H, Nakamura R, Ohara O, Kawashima Y, Optimization of Ultrafast Proteomics Using an LC-Quadrupole-Orbitrap Mass Spectrometer with Data-Independent Acquisition. J Proteome Res, 21(9):2085-2093(2022) [pubmed]

Ishikawa M, Konno R, Nakajima D, Gotoh M, Fukasawa K, Sato H, Nakamura R, Ohara O, Kawashima Y, Optimization of Ultrafast Proteomics Using an LC-Quadrupole-Orbitrap Mass Spectrometer with Data-Independent Acquisition. J Proteome Res, 21(9):2085-2093(2022) [pubmed]

Keyword List

submitter keyword: Q-Orbitrap MS, High-throughput proteomics, DIA

submitter keyword: Q-Orbitrap MS, High-throughput proteomics, DIA

Contact List

Yusuke Kawashima
lab head
Masaki Ishikawa
contact affiliation	Kazusa DNA Institute
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001513/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001513/