PXD034119

PXD034119 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics of Prevotella brevis GA33 and Prevotella ruminicola 23
Description	We performed shotgun proteomics on the bacteria Prevotella brevis GA33 and Prevotella ruminicola 23. We did this for two types of samples (cell extract and cell membrane) and using two methods (data-dependent and data-independent acquisition).
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_09:06:24.538.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Timothy Hackmann
SpeciesList	scientific name: Acyrthosiphon pisum (Pea aphid); NCBI TaxID: 7029;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-05-25 06:54:37	ID requested
1	2023-10-24 07:51:51	announced
⏵ 2	2023-11-14 09:06:25	announced	2023-11-14: Updated project metadata.

Publication List

Zhang B, Lingga C, De Groot H, Hackmann TJ, The oxidoreductase activity of Rnf balances redox cofactors during fermentation of glucose to propionate in Prevotella. Sci Rep, 13(1):16429(2023) [pubmed]

Zhang B, Lingga C, De Groot H, Hackmann TJ, The oxidoreductase activity of Rnf balances redox cofactors during fermentation of glucose to propionate in Prevotella. Sci Rep, 13(1):16429(2023) [pubmed]

Keyword List

submitter keyword: bacteria, LC-MS, rumen

submitter keyword: bacteria, LC-MS, rumen

Contact List

Timothy John Hackmann
contact affiliation	Department of Animal Science, University of California, Davis, USA
contact email	tjhackmann@ucdavis.edu
lab head
Timothy Hackmann
contact affiliation	University of California, Davis
contact email	tjhackmann@ucdavis.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD034119
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/10/PXD034119

PRIDE project URI

Repository Record List

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