PXD033580

PXD033580 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	CAPTURE of the human U2 snRNA genes
Description	In order to identify factors involved in transcription of human snRNA genes and 3’ end processing of the transcripts, we have carried out CRISPR affinity purification in situ of regulatory elements (CAPTURE), which is deadCas9-mediated pull-down, of the tandemly-repeated U2 snRNA genes in human cells. Pull-down proteins were identified by mass spectrometry-based proteomics analysis.
HostingRepository	PRIDE
AnnounceDate	2022-06-09
AnnouncementXML	Submission_2022-06-09_10:26:32.396.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marjorie Fournier
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-05-04 09:02:05	ID requested
⏵ 1	2022-06-09 10:26:33	announced

Publication List

Guiro J, Fagbemi M, Tellier M, Zaborowska J, Barker S, Fournier M, Murphy S, CAPTURE of the Human U2 snRNA Genes Expands the Repertoire of Associated Factors. Biomolecules, 12(5):(2022) [pubmed]

Guiro J, Fagbemi M, Tellier M, Zaborowska J, Barker S, Fournier M, Murphy S, CAPTURE of the Human U2 snRNA Genes Expands the Repertoire of Associated Factors. Biomolecules, 12(5):(2022) [pubmed]

Keyword List

submitter keyword: interactome, snRNA, transcription

submitter keyword: interactome, snRNA, transcription

Contact List

Shona Murphy
contact affiliation	Sir William Dunn School of Pathology, University of Oxford
contact email	shona.murphy@path.ox.ac.uk
lab head
Marjorie Fournier
contact affiliation	University of Oxford
contact email	marjorie.fournier@bioch.ox.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD033580
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD033580

PRIDE project URI

Repository Record List

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