PXD033342

PXD033342 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	N-linked glycan analysis of native SARS-CoV-2 Delta variant Spike
Description	The SARS-CoV-2 Delta variant is more contagious than WT and causes severe symptoms.To understand the elevated fusogenicity of Delta, we used LC-MS/MS to characterize the site specific N-linked glycan of spike protein in SARS-CoV-2 Delta variant virions.The glycan analysis revealed increased oligomannose-type glycosylation of native Delta spike over that of the Wuhan-Hu-1 spike.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:46:47.864.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yutong Song
SpeciesList	scientific name: Severe acute respiratory syndrome coronavirus 2; NCBI TaxID: 2697049;
ModificationList	complex glycosylation
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-04-21 06:47:29	ID requested
1	2023-05-10 13:33:37	announced
⏵ 2	2023-11-14 08:46:51	announced	2023-11-14: Updated project metadata.

Publication List

Song Y, Yao H, Wu N, Xu J, Zhang Z, Peng C, Li S, Kong W, Chen Y, Zhu M, Wang J, Shi D, Zhao C, Lu X, Echavarr, í, a Galindo M, Li S, In situ architecture and membrane fusion of SARS-CoV-2 Delta variant. Proc Natl Acad Sci U S A, 120(18):e2213332120(2023) [pubmed]

Song Y, Yao H, Wu N, Xu J, Zhang Z, Peng C, Li S, Kong W, Chen Y, Zhu M, Wang J, Shi D, Zhao C, Lu X, Echavarr, í, a Galindo M, Li S, In situ architecture and membrane fusion of SARS-CoV-2 Delta variant. Proc Natl Acad Sci U S A, 120(18):e2213332120(2023) [pubmed]

Keyword List

ProteomeXchange project tag: Sars-cov-2, Covid-19
submitter keyword: LC-MS/MS,SARS-CoV-2,N-linked glycan

ProteomeXchange project tag: Sars-cov-2, Covid-19

submitter keyword: LC-MS/MS,SARS-CoV-2,N-linked glycan

Contact List

Sai Li
contact affiliation	School of Life Sciences, Tsinghua University, Beijing, China
contact email	sai@tsinghua.edu.cn
lab head
Yutong Song
contact affiliation	student
contact email	syt18@mails.tsinghua.edu.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD033342
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD033342

PRIDE project URI

Repository Record List

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