PXD033207
PXD033207 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Laser Capture Microdissection of Normal Kidney Biopsy Glomeruli and Tubulointerstitium Characterized by LC-MS/MS |
| Description | The Kidney Precision Medicine Project (KPMP) is funded by the NIDDK for "the purpose of understanding and finding new ways to treat chronic kidney disease and acute kidney injury. " To accomplish this goal, the KPMP chose several technologies to successfully deliver their goals. One of the technologies chosen was using a combination of laser capture microdissection (LCM) in combination with LC -MS /MS to characterize quantitative protein changes in the diseased kidney. The data presented here is from the initial pilot study using normal kidney biopsies for proof of principal. Samples analyzed were either LCM collected glomeruli or tubulointerstitium. Protein was retrieved from the LCM collected tissue, proteins were trypsinized and samples run on the fusion orbitrap. |
| HostingRepository | MassIVE |
| AnnounceDate | 2022-04-15 |
| AnnouncementXML | Submission_2022-04-15_08:17:46.507.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Dr. Miranda Gardner |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | L-methionine sulfoxide; S-carboxamidomethyl-L-cysteine |
| Instrument | Orbitrap Eclipse |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2022-04-13 09:05:26 | ID requested | |
| ⏵ 1 | 2022-04-15 08:17:46 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: Laser Capture Microdissection, Normal Kidney Glomeruli , Normal Kidney Tubulointerstitium, Spectral Counts, Thermo Orbitrap Eclipse, Bottom-up Proteomics |
Contact List
| Samir Parikh | |
|---|---|
| contact affiliation | The Ohio State University Wexner Medical Center |
| contact email | samir.parikh@osumc.edu |
| lab head | |
| Dr. Miranda Gardner | |
| contact affiliation | The Ohio State University |
| contact email | gardner.207@osu.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000089251/ |
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