PXD033181

PXD033181 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Interactions between basic helix-loop-helix transcription factors and nucleosomes
Description	In solution crosslinking mass spectrometry of transcription factors in complex with nucleosomes
HostingRepository	PRIDE
AnnounceDate	2024-11-01
AnnouncementXML	Submission_2024-11-01_09:02:58.003.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jan Seebacher
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	crosslinked residues with loss of water; crosslinked residues; iodoacetamide derivatized residue
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-04-12 05:48:44	ID requested
1	2023-05-23 09:06:01	announced
2	2024-10-22 05:45:52	announced	2024-10-22: Updated project metadata.
⏵ 3	2024-11-01 09:03:00	announced	2024-11-01: Updated project metadata.

Publication List

10.1038/s41586-023-06282-3;
Michael AK, Stoos L, Crosby P, Eggers N, Nie XY, Makasheva K, Minnich M, Healy KL, Weiss J, Kempf G, Cavadini S, Kater L, Seebacher J, Vecchia L, Chakraborty D, Isbel L, Grand RS, Andersch F, Fribourgh JL, Sch, ü, beler D, Zuber J, Liu AC, Becker PB, Fierz B, Partch CL, Menet JS, Thom, ä NH, Cooperation between bHLH transcription factors and histones for DNA access. Nature, 619(7969):385-393(2023) [pubmed]

10.1038/s41586-023-06282-3;

Michael AK, Stoos L, Crosby P, Eggers N, Nie XY, Makasheva K, Minnich M, Healy KL, Weiss J, Kempf G, Cavadini S, Kater L, Seebacher J, Vecchia L, Chakraborty D, Isbel L, Grand RS, Andersch F, Fribourgh JL, Sch, ü, beler D, Zuber J, Liu AC, Becker PB, Fierz B, Partch CL, Menet JS, Thom, ä NH, Cooperation between bHLH transcription factors and histones for DNA access. Nature, 619(7969):385-393(2023) [pubmed]

Keyword List

submitter keyword: DSSO crosslinking xlinkx PD transcription factor nucleosome human

submitter keyword: DSSO crosslinking xlinkx PD transcription factor nucleosome human

Contact List

Nicolas Thoma
contact affiliation	Friedrich Miescher Institute for Biomedical Research, FMI, Switzerland
contact email	nicolas.thoma@fmi.ch
lab head
Jan Seebacher
contact affiliation	FMI Basel
contact email	jan.seebacher@fmi.ch
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD033181
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD033181

PRIDE project URI

Repository Record List

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