PXD032972 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Differential RNA aptamer affinity profiling on plasma as a potential diagnostic tool for bladder cancer |
| Description | APTASHAPE is a new method for characterising the composition of complex biofluids Biomarker discovery is performed using blood from bladder cancer patients APTASHAPE can distinguish blood samples from patients with different stages of bladder cancer |
| HostingRepository | PRIDE |
| AnnounceDate | 2023-11-14 |
| AnnouncementXML | Submission_2023-11-14_07:54:33.918.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Søren Fjelstrup |
| SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
| ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | Orbitrap Fusion |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2022-04-03 08:08:52 | ID requested | |
| 1 | 2022-10-14 05:17:48 | announced | |
| ⏵ 2 | 2023-11-14 07:54:34 | announced | 2023-11-14: Updated project metadata. |
Publication List
| Fjelstrup S, Dupont DM, Bus C, Enghild JJ, Jensen JB, Birkenkamp-Demtr, ö, der K, Dyrskj, ø, t L, Kjems J, Differential RNA aptamer affinity profiling on plasma as a potential diagnostic tool for bladder cancer. NAR Cancer, 4(3):zcac025(2022) [pubmed] |
Keyword List
| submitter keyword: Pulldown, Biofluids,Aptamer, Bladder Cancer |
Contact List
| Jørgen Kjems |
|---|
| contact affiliation | Centre for Cellular Signal Patterns (CellPat) Interdisciplinary Nanoscience Centre (iNANO) Department of Molecular Biology and Genetics Aarhus University |
| contact email | jk@mbg.au.dk |
| lab head | |
| Søren Fjelstrup |
|---|
| contact affiliation | Aarhus University |
| contact email | soeren.fjelstrup@inano.au.dk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD032972 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD032972
- Label: PRIDE project
- Name: Differential RNA aptamer affinity profiling on plasma as a potential diagnostic tool for bladder cancer
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