PXD032354

PXD032354 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	EVALUATION OF RESEARCH BIOPSIES IN KIDNEY TRANSPLANTATION
Description	This study set out to investigate the optimal biopsy size required for adequate quality tissue for histological and proteome assessment while upholding patient safety which is of paramount concern.
HostingRepository	PRIDE
AnnounceDate	2025-05-06
AnnouncementXML	Submission_2025-05-06_08:59:09.502.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sadr Shaheed
SpeciesList	scientific name: Sus scrofa domesticus (domestic pig); NCBI TaxID: 9825;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-03-17 04:19:05	ID requested
⏵ 1	2025-05-06 08:59:10	announced

Publication List

10.1186/s12014-024-09508-2;
Shaheed SU, McGivern H, Oliveira M, Snashall C, Sutton CW, Tam KH, Knight S, Abbas SH, Kers J, Cross S, Ploeg R, Hunter J, Research biopsies in kidney transplantation: an evaluation of surgical techniques and optimal tissue mass allowing molecular and histological analyses. Clin Proteomics, 21(1):55(2024) [pubmed]

10.1186/s12014-024-09508-2;

Shaheed SU, McGivern H, Oliveira M, Snashall C, Sutton CW, Tam KH, Knight S, Abbas SH, Kers J, Cross S, Ploeg R, Hunter J, Research biopsies in kidney transplantation: an evaluation of surgical techniques and optimal tissue mass allowing molecular and histological analyses. Clin Proteomics, 21(1):55(2024) [pubmed]

Keyword List

submitter keyword: Kidney transplantation
punch biopsy
Core needle biopsy
Shotgun Proteomics

submitter keyword: Kidney transplantation

punch biopsy

Core needle biopsy

Shotgun Proteomics

Contact List

Sadr ul Shaheed
contact affiliation	Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom.
contact email	sadr.shaheed@nds.ox.ac.uk
lab head
Sadr Shaheed
contact affiliation	Nuffield Department of Surgical Sciences, University of Oxford, Oxford, United Kingdom
contact email	sadr.shaheed@nds.ox.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD032354
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD032354

PRIDE project URI

Repository Record List

[ + ]