PXD032264

PXD032264 is an original dataset announced via ProteomeXchange.

Title	Research of neopeptides/neoproteins in prostate cancer cell lines
Description	Validation, by mass spectrometry (MS), of predicted neoantigens in urinary extracellular vesicles coming from cancer prostate patients. We performed MS on PC3, LNCaP and HCT116 cells and compared MS-detected peptides with established PC3 lncRNA peptides, peptides from lncRNAs upregulated in uEVs and Swiss prot databanks.
HostingRepository	PRIDE
AnnounceDate	2022-05-31
AnnouncementXML	Submission_2022-05-31_01:49:33.011.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Victor Laigle
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2022-03-14 09:33:45	ID requested
⏵ 1	2022-05-31 01:49:33	announced

Dataset with its publication pending

submitter keyword: Neopeptides, lncRNAs, extracellular vesicles, prostate cancer

Damarys Loew
contact affiliation	Head of the Curie Institute Mass Spectrometry Platform
contact email	damarys.loew@curie.fr
lab head
Victor Laigle
contact affiliation	Mass Spectrometry Proteomics Facility (LSMP) - Institut Curie
contact email	victor.laigle@curie.fr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD032264

PRIDE project URI

• PRIDE
  1. PXD032264
     1. Label: PRIDE project
     2. Name: Research of neopeptides/neoproteins in prostate cancer cell lines