PXD032264 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Research of neopeptides/neoproteins in prostate cancer cell lines |
Description | Validation, by mass spectrometry (MS), of predicted neoantigens in urinary extracellular vesicles coming from cancer prostate patients. We performed MS on PC3, LNCaP and HCT116 cells and compared MS-detected peptides with established PC3 lncRNA peptides, peptides from lncRNAs upregulated in uEVs and Swiss prot databanks. |
HostingRepository | PRIDE |
AnnounceDate | 2022-05-31 |
AnnouncementXML | Submission_2022-05-31_01:49:33.011.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Victor Laigle |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Exploris 480 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-03-14 09:33:45 | ID requested | |
⏵ 1 | 2022-05-31 01:49:33 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Neopeptides, lncRNAs, extracellular vesicles, prostate cancer |
Contact List
Damarys Loew |
contact affiliation | Head of the Curie Institute Mass Spectrometry Platform |
contact email | damarys.loew@curie.fr |
lab head | |
Victor Laigle |
contact affiliation | Mass Spectrometry Proteomics Facility (LSMP) - Institut Curie |
contact email | victor.laigle@curie.fr |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/05/PXD032264 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD032264
- Label: PRIDE project
- Name: Research of neopeptides/neoproteins in prostate cancer cell lines