PXD031918

PXD031918 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comparison of in-solution and SP3 sample processing workflows on HeLa cell samples
Description	Comparison of in-solution and single-pot, solid-phase-enchanced sample preparation (SP3) sample processing workflows on HeLa cell samples, using different lysis buffers based on SDS and guanidine hydrochloride, for optimal analysis by liquid chromatography mass spectrometry (LC-MS)
HostingRepository	PRIDE
AnnounceDate	2022-08-12
AnnouncementXML	Submission_2022-08-12_01:15:05.565.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Maria Hernandez-Valladares
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-02-28 02:23:04	ID requested
⏵ 1	2022-08-12 01:15:06	announced

Publication List

Neset L, Takayidza G, Berven FS, Hernandez-Valladares M, Comparing Efficiency of Lysis Buffer Solutions and Sample Preparation Methods for Liquid Chromatography-Mass Spectrometry Analysis of Human Cells and Plasma. Molecules, 27(11):(2022) [pubmed]

Neset L, Takayidza G, Berven FS, Hernandez-Valladares M, Comparing Efficiency of Lysis Buffer Solutions and Sample Preparation Methods for Liquid Chromatography-Mass Spectrometry Analysis of Human Cells and Plasma. Molecules, 27(11):(2022) [pubmed]

Keyword List

submitter keyword: proteomics, LC-MS, HeLa, SP3,in-solution digestion

submitter keyword: proteomics, LC-MS, HeLa, SP3,in-solution digestion

Contact List

Frode Berven
contact affiliation	Institute of Biomedicine, University of Bergen
contact email	Frode.Berven@uib.no
lab head
Maria Hernandez-Valladares
contact affiliation	University of Bergen
contact email	Maria.Hernandez-Valladares@uib.no
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD031918
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD031918

PRIDE project URI

Repository Record List

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