PXD031778

PXD031778 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Identification of the expression of a novel protein in MCF7 cells
Description	The novel protein GT3-INCP (GATA3-interacting cryptic protein) that were identified by mass spectrometry in the MCF7 cells stably expressing FLAG-tagged CDS, in the presence of the native 5’UTR.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:37:47.829.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yanjun Wei
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-02-21 02:46:07	ID requested
1	2023-03-10 23:07:17	announced
⏵ 2	2023-11-14 08:37:48	announced	2023-11-14: Updated project metadata.

Publication List

Zheng C, Wei Y, Zhang P, Xu L, Zhang Z, Lin K, Hou J, Lv X, Ding Y, Chiu Y, Jain A, Islam N, Malovannaya A, Wu Y, Ding F, Xu H, Sun M, Chen X, Chen Y, CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer. J Clin Invest, 133(5):(2023) [pubmed]

Zheng C, Wei Y, Zhang P, Xu L, Zhang Z, Lin K, Hou J, Lv X, Ding Y, Chiu Y, Jain A, Islam N, Malovannaya A, Wu Y, Ding F, Xu H, Sun M, Chen X, Chen Y, CRISPR/Cas9 screen uncovers functional translation of cryptic lncRNA-encoded open reading frames in human cancer. J Clin Invest, 133(5):(2023) [pubmed]

Keyword List

submitter keyword: Human, ORFs, GT3-INCP, BRCA, ER, GATA3

submitter keyword: Human, ORFs, GT3-INCP, BRCA, ER, GATA3

Contact List

Yiwen Chen
contact affiliation	Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center
contact email	YChen26@mdanderson.org
lab head
Yanjun Wei
contact affiliation	MDACC
contact email	jason.yj.wei@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD031778
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD031778

PRIDE project URI

Repository Record List

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