PXD031680

PXD031680 is an original dataset announced via ProteomeXchange.

Title	Proteomic profiling of Lemna minor exposed to Atorvastatin
Description	Lemna minor a small aquatic plant has been used extensively in ecotoxicolgical testing to elucidate substance-related effects to freshwater plants. They are free-floating freshwater macrophyte, very sensitive towards chemical exposure and easy to cultivate thus makes the plant suitable for laboratory testing. Here we present a rapid and reproducible data dependent proteomics approach for identifying growth related molecular signatures in lemna minor as an alternative to algae testing. For this, we have analyzed the proteome of lemna minor exposed to atorvastatin as a model substances for identifying growth related molecular perturbations. These fingerprints allow for a definition of potential biomarkers as tools in screening approaches and for integration in plant growth inhibition studies (OECD TG 221), for identifying suspect substances.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:55:06.775.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Steve Ayobahan
SpeciesList	scientific name: Lemna minor; NCBI TaxID: 4472;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2022-02-15 01:38:11	ID requested
1	2022-08-15 00:17:17	announced
⏵ 2	2023-11-14 08:55:07	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: Lemna minor, Aquatic ecotoxicology, LC-MS/MS

Dr. Sebastian Eilebrecht
contact affiliation	Fraunhofer Attract Eco’n’OMICs Fraunhofer Institute for Molecular Biology and Applied Ecology IME Auf dem Aberg 1 | 57392 Schmallenberg | Germany
contact email	sebastian.eilebrecht@ime.fraunhofer.de
lab head
Steve Ayobahan
contact affiliation	Fraunhofer IME
contact email	steve.ayobahan@ime.fraunhofer.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD031680

PRIDE project URI

• PRIDE
  1. PXD031680
     1. Label: PRIDE project
     2. Name: Proteomic profiling of Lemna minor exposed to Atorvastatin