PXD031538 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification of a previously uncharacterised polypeptide component of the Rhodopseudomonas palustris light-harvesting 2 complex. |
Description | The purple bacterium Rhodopseudomonas palustris is a model organism for dissecting the energy and electron transfer processes that have evolved in phototrophic organisms. This bacterium is of particular interest because, in addition to driving its metabolism via solar energy capture, it is capable of nitrogen and carbon dioxide fixation, producing hydrogen and utilising a wide range of organic compounds. Understanding these processes underpins the potential exploitation of Rhodopseudomonas palustris for synthetic biology, biohydrogen production and bioremediation, for example. Like other purple bacteria, Rhodopseudomonas palustris has 2 light-harvesting (LH) systems: LH1 and LH2. The former has already been extensively characterised by X-ray crystallography and cryo-EM. The aim of this proteomics project is to provide complementary information to support the cryo-EM mapping of LH2 structure. |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:59:04.578.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Philip Jackson |
SpeciesList | scientific name: Rhodopseudomonas palustris CGA009; NCBI TaxID: 258594; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2022-02-09 07:47:09 | ID requested | |
1 | 2022-10-18 08:04:25 | announced | |
⏵ 2 | 2023-11-14 08:59:05 | announced | 2023-11-14: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Light-harvesting 2 complex,Rhodopseudomonas palustris, Gamma-subunit, Rpa_1495 |
Contact List
C Neil Hunter |
contact affiliation | School of Biosciences, University of Sheffield, UK |
contact email | c.n.hunter@sheffield.ac.uk |
lab head | |
Philip Jackson |
contact affiliation | School of Biosciences, University of Sheffield |
contact email | p.j.jackson@sheffield.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD031538 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD031538
- Label: PRIDE project
- Name: Identification of a previously uncharacterised polypeptide component of the Rhodopseudomonas palustris light-harvesting 2 complex.