PXD031352

PXD031352 is an original dataset announced via ProteomeXchange.

Title	A proteomic view of artificially aged seeds of three rice lines of Kasalath with different anti-aging ability guided by miR164c
Description	MicroRNAs (miRNAs) play important roles in various aspects of plant physiology and metabolism. The expression level of miR164c is negatively correlated with seed vigor in rice (Oryza sativa L.); however, the mechanism of seed vigor regulation by miR164c remains unknown. Here, we studied the proteomic difference between artificially aged seeds of the wild-type rice cultivar ‘Kasalath’ and its transgenic derivatives, miR164c-silenced line (MIM164c) and miR164c overexpression line (OE164c), with significant differences in anti-aging capacity. We hope that it can provide new insights into the mechanism of miRNA on regulating seed vigor.
HostingRepository	PRIDE
AnnounceDate	2022-06-09
AnnouncementXML	Submission_2022-06-09_08:29:22.795.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kerui Huang
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-31 01:08:20	ID requested
⏵ 1	2022-06-09 08:29:23	announced

Zhou S, Huang K, Zhou Y, Hu Y, Xiao Y, Chen T, Yin M, Liu Y, Xu M, Jiang X, Degradome sequencing reveals an integrative miRNA-mediated gene interaction network regulating rice seed vigor. BMC Plant Biol, 22(1):269(2022) [pubmed]

submitter keyword: miR164c

Oryza sativa

anti-aging ability

TMT

Kasalath

Xiaocheng Jiang
contact affiliation	College of Life Sciences, Hunan Normal University
contact email	jxclc@hunnu.edu.cn
lab head
Kerui Huang
contact affiliation	Hunan Normal University
contact email	201610140156@smail.hunnu.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD031352

PRIDE project URI

• PRIDE
  1. PXD031352
     1. Label: PRIDE project
     2. Name: A proteomic view of artificially aged seeds of three rice lines of Kasalath with different anti-aging ability guided by miR164c