PXD031126

PXD031126 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Middle Island Sinkhole Microbial Mat - Seasonality
Description	Samples from benthic phototrophic microbial mats of Middle Island Sinkhole, Lake Huron, MI, USA. Peptides labeled in vitro for quantitative analysis by diDO-IPTL (Waldbauer et al. 2017 Anal. Chem.).
HostingRepository	MassIVE
AnnounceDate	2024-11-13
AnnouncementXML	Submission_2024-11-13_09:47:06.714.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jacob Waldbauer
SpeciesList	scientific name: microbial mat metagenome; NCBI TaxID: 527640;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-20 10:27:56	ID requested
⏵ 1	2024-11-13 09:47:07	announced

Publication List

Grim SL, Stuart DG, Aron P, Levin NE, Kinsman-Costello L, Waldbauer JR, Dick GJ, Seasonal shifts in community composition and proteome expression in a sulphur-cycling cyanobacterial mat. Environ Microbiol, 25(11):2516-2533(2023) [pubmed]

Grim SL, Stuart DG, Aron P, Levin NE, Kinsman-Costello L, Waldbauer JR, Dick GJ, Seasonal shifts in community composition and proteome expression in a sulphur-cycling cyanobacterial mat. Environ Microbiol, 25(11):2516-2533(2023) [pubmed]

Keyword List

submitter keyword: microbial mat, phototrophy, sulfur, sinkhole, diDO-IPTL

submitter keyword: microbial mat, phototrophy, sulfur, sinkhole, diDO-IPTL

Contact List

Jacob Waldbauer
contact affiliation	University of Chicago
contact email	jwal@uchicago.edu
lab head
Gregory Dick
contact affiliation	University of Michigan, Ann Arbor
contact email	gdick@umich.edu
lab head
Jacob Waldbauer
contact affiliation	University of Chicago
contact email	jwal@uchicago.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v04/MSV000088706/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v04/MSV000088706/