PXD031015

PXD031015 is an original dataset announced via ProteomeXchange.

Title	Gut bacterial nutrient preferences quantified in vivo
Description	We quantitatively examine inputs and outputs of the mouse gut microbiome, using isotope tracing. To determine nutrient preferences across bacteria, we traced into genus-specific bacterial protein sequences. By in vivo isotope tracer feeding, mapped the contribution of different dietary nutrients vs circulating nutrients contribution to different gut bacterial genera.
HostingRepository	PRIDE
AnnounceDate	2022-08-17
AnnouncementXML	Submission_2022-08-17_13:59:21.225.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xianfeng Zeng
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-16 23:11:27	ID requested
⏵ 1	2022-08-17 13:59:22	announced

Castronovo V, Claysmith AP, Barker KT, Cioce V, Krutzsch HC, Sobel ME, Biosynthesis of the 67 kDa high affinity laminin receptor. Biochem Biophys Res Commun, 177(1):177-83(1991) [pubmed]

submitter keyword: Mouse, Microbiome, Isotope, Cecal Content

Joshua D. Rabinowitz
contact affiliation	Department of Chemistry, Princeton University, Princeton, New Jersey 08544, USA Ludwig Institute for Cancer Research, Princeton Branch, Princeton University, Princeton, NJ 08544, USA (lab head)
contact email	joshr@princeton.edu
lab head
Xianfeng Zeng
contact affiliation	Princeton University
contact email	xzeng@princeton.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD031015

PRIDE project URI

• PRIDE
  1. PXD031015
     1. Label: PRIDE project
     2. Name: Gut bacterial nutrient preferences quantified in vivo