PXD031000

PXD031000 is an original dataset announced via ProteomeXchange.

Title	Proteomes of the cold-adapted Baikal region amphipods exposed to heat shock
Description	The proteomes of three amphipod species, a Holarctic species Gammarus lacustris and two Biakal species Eulimnogammarus verrucosus and Eulimnogammarus cyaneus, were received by LC-MS/MS with TMT-labeling. All animals were collected in August 2018. Before the exposition, animals were acclimated in 6C for 25 days. Three species of amphipods were exposed to heat stress (24.6 C for 24 h) and control temperature (6C for 24 h).
HostingRepository	PRIDE
AnnounceDate	2024-02-15
AnnouncementXML	Submission_2024-02-15_10:22:22.848.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD031000
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Polina Lipaeva
SpeciesList	scientific name: Gammarus lacustris; NCBI TaxID: 52639; scientific name: Eulimnogammarus cyaneus; NCBI TaxID: 52945; scientific name: Eulimnogammarus verrucosus; NCBI TaxID: 36941;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-16 14:01:47	ID requested
⏵ 1	2024-02-15 10:22:23	announced

10.6019/PXD031000;

Lipaeva P, Karkossa I, Bedulina D, Schubert K, Luckenbach T, Cold-adapted amphipod species upon heat stress: Proteomic responses and their correlation with transcriptomic responses. Comp Biochem Physiol Part D Genomics Proteomics, 45():101048(2023) [pubmed]

10.1016/j.cbd.2022.101048;

submitter keyword: LC-MSMS, heat shock, TMT-labeling,amphipods

Till Luckenbach
contact affiliation	Department of Bioanalytical Ecotoxicology, Helmholtz Centre for Environmental Research—UFZ, Leipzig, Germany
contact email	till.luckenbach@ufz.de
lab head
Polina Lipaeva
contact affiliation	Department of Endocrinology and Diabetology, Medical Faculty and University Hospital, Heinrich-Heine-University, Düsseldorf, Germany
contact email	polina.lipaeva@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/02/PXD031000

PRIDE project URI

• PRIDE
  1. PXD031000
     1. Label: PRIDE project
     2. Name: Proteomes of the cold-adapted Baikal region amphipods exposed to heat shock