PXD030990

PXD030990 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comparison of Different Mass-Spectrometry Workflows for the Proteomic Analysis of Tear Fluid
Description	Proteomic analysis of tear fluid is challenging mainly due to a wide dynamic range of proteins and small sample volume. However, recent advancements in mass spectrometry have revolutionized the field of proteomics through its unprecedented depth, speed, and accuracy even with small sample volumes. In this study using the Orbitrap Fusion Tribrid mass spectrometer, we compared four different mass-spectrometry workflows for proteomic analysis of human tear fluid.
HostingRepository	PRIDE
AnnounceDate	2022-04-04
AnnouncementXML	Submission_2022-04-03_20:00:15.151.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ashok Sharma
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-16 09:25:24	ID requested
⏵ 1	2022-04-03 20:00:16	announced

Publication List

Jones G, Lee TJ, Glass J, Rountree G, Ulrich L, Estes A, Sezer M, Zhi W, Sharma S, Sharma A, Comparison of Different Mass Spectrometry Workflows for the Proteomic Analysis of Tear Fluid. Int J Mol Sci, 23(4):(2022) [pubmed]

Jones G, Lee TJ, Glass J, Rountree G, Ulrich L, Estes A, Sezer M, Zhi W, Sharma S, Sharma A, Comparison of Different Mass Spectrometry Workflows for the Proteomic Analysis of Tear Fluid. Int J Mol Sci, 23(4):(2022) [pubmed]

Keyword List

submitter keyword: Tear film
Proteomics
Biomarkers
Dry eye disease
Ocular surface
Mass spectrometry

submitter keyword: Tear film

Proteomics

Biomarkers

Dry eye disease

Ocular surface

Mass spectrometry

Contact List

Ashok Sharma
contact affiliation	Center for Biotechnology & Genomic Medicine, Dept. of Population Health Sciences Medical College of Georgia at Augusta University
contact email	assharma@augusta.edu
lab head
Ashok Sharma
contact affiliation	Augusta University
contact email	assharma@augusta.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD030990
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD030990

PRIDE project URI

Repository Record List

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