PXD030890

PXD030890 is an original dataset announced via ProteomeXchange.

Title	Designing workflows for large-scale Omic Based biomarker identification for hepatocellular carcinoma
Description	Ter-polymer (MMA/EGDMA/1,2-Epoxy-5-Hexene) is fabricated via the polymerization using ethylene glycol di-methacrylate (EGDMA) as polar crosslinker. The oxirane groups of ter-polymer are immobilized with cysteic acid to enhance the hydrophilicity of HILIC sorbent. The enrichment efficacy is evaluated using the tryptic digests of HRP and IgG. Cya@terpolymer shows good potential for the intact N-linked glycopeptides enrichment from human serum.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:17:32.134.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Habtom Ressom
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	complex glycosylation
Instrument	Q Exactive HF; ultraflex

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-11 01:36:28	ID requested
1	2022-10-14 10:51:31	announced
⏵ 2	2023-11-14 07:17:32	announced	2023-11-14: Updated project metadata.

Sajid MS, Saleem S, Jabeen F, Najam-Ul-Haq M, Ressom HW, Terpolymeric platform with enhanced hydrophilicity via cysteic acid for serum intact glycopeptide analysis. Mikrochim Acta, 189(8):277(2022) [pubmed]

submitter keyword: ter-Polymer, Cysteic acid, Enrichment, Mass spectrometry,HILIC

Habtom Ressom
contact affiliation	Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington DC
contact email	hwr@georgetown.edu
lab head
Habtom Ressom
contact affiliation	Georgetown University
contact email	hwr@georgetown.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/10/PXD030890

PRIDE project URI

• PRIDE
  1. PXD030890
     1. Label: PRIDE project
     2. Name: Designing workflows for large-scale Omic Based biomarker identification for hepatocellular carcinoma