PXD030702

PXD030702 is an original dataset announced via ProteomeXchange.

Title	Differential gene expression of yeast colonies in response to lysine
Description	Saccharomyces cerevisiae colonies were grown for 2 days on synthetic minimal media with 1% glucose, with and without 400uM lysine (5 colonies/biological replicates each). Whole colonies were then used for proteome profiling by SWATH-MS for differential gene expression analysis. A number of genes were identified that respond to lysine supplementation, most notably genes involved in lysine biosynthesis.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:55:05.028.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Stephan Kamrad
SpeciesList	scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 6600

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-04 01:23:29	ID requested
1	2023-02-13 04:42:42	announced
⏵ 2	2023-11-14 08:55:05	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: DIA, SWATH, gene expression, lysine, colony,Saccharomyces cerevisiae

Markus Ralser
contact affiliation	Charité Universitätsmedizin Berlin, Institute of Biochemistry
contact email	markus.ralser@charite.de
lab head
Stephan Kamrad
contact affiliation	The Francis Crick Institute
contact email	stephan.kamrad@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/02/PXD030702

PRIDE project URI

• PRIDE
  1. PXD030702
     1. Label: PRIDE project
     2. Name: Differential gene expression of yeast colonies in response to lysine