PXD030697

PXD030697 is an original dataset announced via ProteomeXchange.

Title	Apoptotic auditory brainstem of E13 chick embryo
Description	We characterized the proteome of the auditory brainstem of a chick embryo on embryonic day 13, when apoptosis occurs in auditory nuclei. We identified caspase substrates by searching the peptidome for peptides C-terminal to caspase-typical cleavage sites.
HostingRepository	PRIDE
AnnounceDate	2022-05-25
AnnouncementXML	Submission_2022-05-25_03:40:45.052.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Forrest Weghorst
SpeciesList	scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2022-01-04 01:07:54	ID requested
⏵ 1	2022-05-25 03:40:45	announced

Weghorst F, Mirzakhanyan Y, Hernandez KL, Gershon PD, Cramer KS, Non-Apoptotic Caspase Activity Preferentially Targets a Novel Consensus Sequence Associated With Cytoskeletal Proteins in the Developing Auditory Brainstem. Front Cell Dev Biol, 10():844844(2022) [pubmed]

submitter keyword: Apoptosis, brainstem, chick, auditory, caspase

Karina Cramer
contact affiliation	Department of Neurobiology and Behavior, University of California, Irvine, USA
contact email	cramerk@uci.edu
lab head
Forrest Weghorst
contact affiliation	Department of Neurobiology and Behavior, University of California, Irvine
contact email	fweghors@uci.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD030697

PRIDE project URI

• PRIDE
  1. PXD030697
     1. Label: PRIDE project
     2. Name: Apoptotic auditory brainstem of E13 chick embryo