PXD030665

PXD030665 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A nuclear receptor facilitates differentiation of human PSCs into more mature hepatocytes
Description	To start examining the mechanisms by which THRB mediated the epigenetic changes, we performed immunoprecipitation (IP) of THRB in THRB-FLAG HepG2 cells with anti-FLAG antibody, followed by mass-spectrometry to identify THRB-binding proteins.
HostingRepository	PRIDE
AnnounceDate	2022-03-25
AnnouncementXML	Submission_2022-05-06_10:38:00.265.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD030665
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Haiting Ma
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 480

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-30 03:33:40	ID requested
1	2022-03-25 02:33:17	announced
⏵ 2	2022-05-06 10:38:00	announced	2022-05-06: Updated publication reference for PubMed record(s): 35452598.

Publication List

Ma H, de Zwaan E, Guo YE, Cejas P, Thiru P, van de Bunt M, Jeppesen JF, Syamala S, Dall'Agnese A, Abraham BJ, Fu D, Garrett-Engele C, Lee TI, Long HW, Griffith LG, Young RA, Jaenisch R, The nuclear receptor THRB facilitates differentiation of human PSCs into more mature hepatocytes. Cell Stem Cell, 29(5):795-809.e11(2022) [pubmed]

Ma H, de Zwaan E, Guo YE, Cejas P, Thiru P, van de Bunt M, Jeppesen JF, Syamala S, Dall'Agnese A, Abraham BJ, Fu D, Garrett-Engele C, Lee TI, Long HW, Griffith LG, Young RA, Jaenisch R, The nuclear receptor THRB facilitates differentiation of human PSCs into more mature hepatocytes. Cell Stem Cell, 29(5):795-809.e11(2022) [pubmed]

Keyword List

submitter keyword: Human, THRB-FLAG-HepG2, THRB interacting proteins

submitter keyword: Human, THRB-FLAG-HepG2, THRB interacting proteins

Contact List

Rudolf Jaenisch
contact affiliation	Whitehead Institute for Biomedical Research
contact email	jaenisch@wi.mit.edu
lab head
Haiting Ma
contact affiliation	Whitehead Institute
contact email	haiting.ma@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD030665
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD030665

PRIDE project URI

Repository Record List

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