PXD030620

PXD030620 is an original dataset announced via ProteomeXchange.

Title	Antisense affinity selection of the lncRNA NTRAS in HeLa lysate
Description	Biochemical characterization of the hypoxia-induced long non coding RNA NTRAS. NTRAS was found to regulate cell cycle progression, in vitro sprouting angiogenesis, and the paracellular permeability in human umbilical vein endothelial cells (HUVECs). Using desthiobiotinylated 2’O-Me-RNA probes, we purified endogenous NTRAS-protein-complexes and identified NTRAS interacting proteins by mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2022-04-26
AnnouncementXML	Submission_2022-04-25_19:13:12.953.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ilka Wittig
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-23 00:37:06	ID requested
⏵ 1	2022-04-25 19:13:13	announced

Dataset with its publication pending

submitter keyword: Antisense affinity selection, lncRNA, RNA-protein-interaction

Nicolas Jaé
contact affiliation	Institute of Cardiovascular Regeneration Centre of Molecular Medicine, Goethe University, Frankfurt am Main, Germany
contact email	Jae@med.uni-frankfurt.de
lab head
Ilka Wittig
contact affiliation	Functional Proteomics, Goethe University, Frankfurt am Main , Germany
contact email	wittig@med.uni-frankfurt.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD030620

PRIDE project URI

• PRIDE
  1. PXD030620
     1. Label: PRIDE project
     2. Name: Antisense affinity selection of the lncRNA NTRAS in HeLa lysate