PXD030575

PXD030575 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomic comparison between wild type Col and sec-5 mutant using 15N metabolic labeling
Description	SECRET AGENT (SEC) is an O-GlcNAc transferase involved in O-GlcNAcylation of many proteins. However, sec-5 null allele mutant phenotype is very subtle. To examine if there are proteins that show altered expression in the sec-5 mutant compared to wild-type Col, we designed MS experiments to identify these candidates on a global scale using 15N metabolic labeling.
HostingRepository	PRIDE
AnnounceDate	2022-02-04
AnnouncementXML	Submission_2022-02-04_01:38:09.137.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shouling Xu
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-21 12:15:58	ID requested
⏵ 1	2022-02-04 01:38:09	announced

Dataset with its publication pending

submitter keyword: Quantification, 15N Metabolic labeling, Protein Prospector, Arabidopsis, SECRET AGENT (SEC)

Shouling Xu
contact affiliation	Director of Carnegie Mass Spectrometry Facility, Carnegie Institution for Science, Stanford
contact email	sxu@ciw.edu
lab head
Shouling Xu
contact affiliation	Carnegie Institution at Stanford
contact email	sxu@ciw.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD030575

PRIDE project URI

• PRIDE
  1. PXD030575
     1. Label: PRIDE project
     2. Name: Quantitative proteomic comparison between wild type Col and sec-5 mutant using 15N metabolic labeling