PXD030395

PXD030395 is an original dataset announced via ProteomeXchange.

Title	TMT proteomics and phosphoproteomics of SARS-CoV-2 infected Calu-3 cells
Description	Proteomics and phosphoproteomics measurments of human a lung epithelial cell line (Calu-3 cells) infected with the novel coronavirus SARS-CoV-2 over a time-course of 4,8 and 12 hours.
HostingRepository	PRIDE
AnnounceDate	2022-07-08
AnnouncementXML	Submission_2022-07-08_03:33:30.219.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tommaso Mari
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue
Instrument	Orbitrap Exploris 480

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-14 08:30:36	ID requested
⏵ 1	2022-07-08 03:33:31	announced

Mari T, M, ö, sbauer K, Wyler E, Landthaler M, Drosten C, Selbach M, In Vitro Kinase-to-Phosphosite Database (iKiP-DB) Predicts Kinase Activity in Phosphoproteomic Datasets. J Proteome Res, 21(6):1575-1587(2022) [pubmed]

submitter keyword: Human, SARS-CoV-2, TMTpro, proteomics, phosphoproteomics, lung cell line

Matthias Selbach
contact affiliation	Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association (MDC), Proteome Dynamics, Berlin, Germany.
contact email	matthias.selbach@mdc-berlin.de
lab head
Tommaso Mari
contact affiliation	Max Delbrück Center for Molecular Medicine - MDC
contact email	tommaso.mari@mdc-berlin.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/07/PXD030395

PRIDE project URI

• PRIDE
  1. PXD030395
     1. Label: PRIDE project
     2. Name: TMT proteomics and phosphoproteomics of SARS-CoV-2 infected Calu-3 cells