PXD030327 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Enhanced competition at the nano-bio interface enables ultra-deep coverage of the human plasma proteome |
Description | We demonstrate the importance of the protein to NP-surface ratio (P/NP) and model protein corona formation dynamics, which determine the competition between proteins for binding. |
HostingRepository | PRIDE |
AnnounceDate | 2022-09-04 |
AnnouncementXML | Submission_2022-09-03_17:17:33.287.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Theo Platt |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | timsTOF Pro 2 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-12-12 05:14:51 | ID requested | |
⏵ 1 | 2022-09-03 17:17:34 | announced | |
Publication List
Ferdosi S, Stukalov A, Hasan M, Tangeysh B, Brown TR, Wang T, Elgierari EM, Zhao X, Huang Y, Alavi A, Lee-McMullen B, Chu J, Figa M, Tao W, Wang J, Goldberg M, O'Brien ES, Xia H, Stolarczyk C, Weissleder R, Farias V, Batzoglou S, Siddiqui A, Farokhzad OC, Hornburg D, Enhanced Competition at the Nano-Bio Interface Enables Comprehensive Characterization of Protein Corona Dynamics and Deep Coverage of Proteomes. Adv Mater, 34(44):e2206008(2022) [pubmed] |
Keyword List
submitter keyword: Proteomics, Nanoparticles, Mass spectrometry, Nano-bio interactions, Protein corona, Vroman effect, Machine learning |
Contact List
Daniel Hornburg |
contact affiliation | Seer Inc. |
contact email | dhornburg@seer.bio |
lab head | |
Theo Platt |
contact affiliation | Seer |
contact email | tplatt@seer.bio |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/09/PXD030327 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD030327
- Label: PRIDE project
- Name: Enhanced competition at the nano-bio interface enables ultra-deep coverage of the human plasma proteome