⮝ Full datasets listing

PXD030327

PXD030327 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleEnhanced competition at the nano-bio interface enables ultra-deep coverage of the human plasma proteome
DescriptionWe demonstrate the importance of the protein to NP-surface ratio (P/NP) and model protein corona formation dynamics, which determine the competition between proteins for binding.
HostingRepositoryPRIDE
AnnounceDate2022-09-04
AnnouncementXMLSubmission_2022-09-03_17:17:33.287.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterTheo Platt
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumenttimsTOF Pro 2
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-12-12 05:14:51ID requested
12022-09-03 17:17:34announced
Publication List
Ferdosi S, Stukalov A, Hasan M, Tangeysh B, Brown TR, Wang T, Elgierari EM, Zhao X, Huang Y, Alavi A, Lee-McMullen B, Chu J, Figa M, Tao W, Wang J, Goldberg M, O'Brien ES, Xia H, Stolarczyk C, Weissleder R, Farias V, Batzoglou S, Siddiqui A, Farokhzad OC, Hornburg D, Enhanced Competition at the Nano-Bio Interface Enables Comprehensive Characterization of Protein Corona Dynamics and Deep Coverage of Proteomes. Adv Mater, 34(44):e2206008(2022) [pubmed]
Keyword List
submitter keyword: Proteomics, Nanoparticles, Mass spectrometry, Nano-bio interactions, Protein corona, Vroman effect, Machine learning
Contact List
Daniel Hornburg
contact affiliationSeer Inc.
contact emaildhornburg@seer.bio
lab head
Theo Platt
contact affiliationSeer
contact emailtplatt@seer.bio
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/09/PXD030327
PRIDE project URI
Repository Record List
[ + ]