PXD030274

PXD030274 is an original dataset announced via ProteomeXchange.

Title	Proteome-wide identifying site non-specific cross-linking peptides with SpotLink
Description	We developed SpotLink to identify site non-specific cross-links from the proteome scale. Here described the Abeta dataset and the HeLa dataset to evaluate SpotLink.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:54:11.364.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	weijie zhang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Exploris 480; Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-09 02:55:49	ID requested
1	2022-08-24 18:54:11	announced
⏵ 2	2023-11-14 08:54:11	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

submitter keyword: SpotLink,cross-linking,CX-MS,site non-specific,CL-MS,proteome

Lihua Zhang
contact affiliation	National Chromatography Research and Analysis Center,Department of Biology,Dalian Institute of Chemical Physics
contact email	lihuazhang@dicp.ac.cn
lab head
weijie zhang
contact affiliation	Dalian institute of chemical physics
contact email	zhangweijiechem@outlook.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/08/PXD030274

PRIDE project URI

• PRIDE
  1. PXD030274
     1. Label: PRIDE project
     2. Name: Proteome-wide identifying site non-specific cross-linking peptides with SpotLink