PXD030238

PXD030238 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Interactome Analysis of NDP52 by LC-MS/MS
Description	NDP52 is an autophagy receptor, with known cytoplasmic binding partners. However, little is known regarding the nuclear functions of this protein. To investigate possible nuclear roles of NDP52 and find new interacting proteins, we performed LC-MS/MS affinity purification experiments.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_05:44:33.746.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Chris Toseland
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Synapt MS

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-08 02:37:52	ID requested
1	2023-11-07 06:38:42	announced
2	2023-11-14 09:13:41	announced	2023-11-14: Updated project metadata.
⏵ 3	2024-10-22 05:44:34	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41467-023-38572-9;
Dos Santos Á, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYZ, Pidlisna K, Stranger A, Lorgat F, Lambert D, Brown I, Howland K, Aaron J, Wang L, Ellis PJI, Chew TL, Martin-Fernandez M, Pyne ALB, Toseland CP, Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription. Nat Commun, 14(1):2855(2023) [pubmed]

10.1038/s41467-023-38572-9;

Dos Santos Á, Rollins DE, Hari-Gupta Y, McArthur H, Du M, Ru SYZ, Pidlisna K, Stranger A, Lorgat F, Lambert D, Brown I, Howland K, Aaron J, Wang L, Ellis PJI, Chew TL, Martin-Fernandez M, Pyne ALB, Toseland CP, Autophagy receptor NDP52 alters DNA conformation to modulate RNA polymerase II transcription. Nat Commun, 14(1):2855(2023) [pubmed]

Keyword List

submitter keyword: alpha-amanitin,LC-MS/MS, NDP52, HeLa

submitter keyword: alpha-amanitin,LC-MS/MS, NDP52, HeLa

Contact List

Christopher Toseland
contact affiliation	University of Sheffield
contact email	c.toseland@sheffield.ac.uk
lab head
Chris Toseland
contact affiliation	University of Sheffield
contact email	c.toseland@sheffield.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD030238
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/03/PXD030238

PRIDE project URI

Repository Record List

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