PXD030143 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | DIA-MS of plethodontid salamander sperm |
Description | Plethodontid salamanders are the largest family of salamanders and are classic models for studying the effect of rapidly evolving courtship pheromones on mating behavior and reproductive success. Despite interests in plethodontid reproduction, very little is known about the molecular composition of salamander gametes, as the extraordinary sizes of their genomes have impaired the development of various omic-scale resources. To identify what proteins may be expressed in salamander sperm, we performed DIA-MS on sperm samples from two plethodontid species, Plethodon shermani and Desmognathus ocoee. As the first detailed study of salamander sperm, this study partially fills in a critical taxonomic gap in the study of fertilization proteins in vertebrates. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_05:35:55.661.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Damien Wilburn |
SpeciesList | scientific name: Plethodon shermani; NCBI TaxID: 263671; scientific name: Desmognathus ocoee; NCBI TaxID: 179530; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Orbitrap Exploris 480 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-12-02 10:54:46 | ID requested | |
1 | 2022-04-19 06:59:52 | announced | |
⏵ 2 | 2024-10-22 05:35:56 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.3389/fcell.2022.828947; |
Wilburn DB, Kunkel CL, Feldhoff RC, Feldhoff PW, Searle BC, Recurrent Co-Option and Recombination of Cytokine and Three Finger Proteins in Multiple Reproductive Tissues Throughout Salamander Evolution. Front Cell Dev Biol, 10():828947(2022) [pubmed] |
Keyword List
submitter keyword: salamander, sperm,plethodontid |
Contact List
Brian Searle |
contact affiliation | Biomedical Informatics, The Ohio State University, United States |
contact email | Brian.Searle@osumc.edu |
lab head | |
Damien Wilburn |
contact affiliation | The Ohio State University |
contact email | Damien.Wilburn@osumc.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD030143 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD030143
- Label: PRIDE project
- Name: DIA-MS of plethodontid salamander sperm