PXD030126

PXD030126 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Impact of Stringent Stress Response and Amino Acid Supplementation on Recombinant Protein Production in Escherichia coli
Description	Metabolic burden can only be understood if changes in gene expression patterns and corresponding proteins/metabolites of the non-recombinant (WT) host were investigated along with recombinant under similar growth conditions. Intriguing cellular regulation in terms of genes and proteins will be helpful to understand the metabolic burden, thereby recombinant protein production associated with cellular reprogramming.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_06:51:39.170.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD030126
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Girish Halemirle Rajacharya
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-12-02 04:27:23	ID requested
1	2024-07-28 10:32:11	announced
⏵ 2	2024-10-22 06:51:39	announced	2024-10-22: Updated project metadata.

Publication List

10.6019/PXD030126;

10.6019/PXD030126;

Keyword List

ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project, Bioinformatics Infrastructure for Life Sciences (BILS) network (Sweden)
submitter keyword: Recombinant protein production, Omics analysis, mass spectrometry, stringent response.

ProteomeXchange project tag: Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project, Bioinformatics Infrastructure for Life Sciences (BILS) network (Sweden)

submitter keyword: Recombinant protein production, Omics analysis, mass spectrometry, stringent response.

Contact List

Anurag Singh
contact affiliation	Department of Chemical Engineering, Indian Institute of Technology, Delhi
contact email	asrathore@biotechcmz.com
lab head
Girish Halemirle Rajacharya
contact affiliation	Indian Institute of Technology, Delhi
contact email	hr.girish014@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD030126
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/07/PXD030126

PRIDE project URI

Repository Record List

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