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PXD030098

PXD030098 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleRelative quantification of 15N labeled acinus-2 pinin-1 and 14N labeled Col through Data Dependent Acquisition to obtain peptide information for targeted Parallel Reaction Monitoring experiment
DescriptionTo examine the properties of 14N and 15N labeled peptides using Parallel Reaction Monitoring (PRM) on a high resolution, high accuracy mass spectrometer we first set up this DDA experiment. The purpose of this experiment was to choose peptides that are good candidates for targeted quantification. The retention times, mass, and charge from 42 candidate peptides were acquired for targeted quantification.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_05:37:41.026.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterShouling Xu
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListacetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
InstrumentQ Exactive HF
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-12-02 02:21:28ID requested
12022-06-09 04:30:02announced
22024-10-22 05:37:41announced2024-10-22: Updated project metadata.
Publication List
Reyes AV, Shrestha R, Baker PR, Chalkley RJ, Xu SL, N Labeled Samples for Quantification. Front Plant Sci, 13():832585(2022) [pubmed]
10.3389/fpls.2022.832585;
Keyword List
submitter keyword: Arabidopsis,Quantification, Data dependent acquisition, 15N Metabolic labeling, Relative quantification, SILAC, Protein Prospector
Contact List
Shouling Xu
contact affiliationCarnegie Mass Spectrometry Facility, Carnegie Institution for Science at Stanford
contact emailsxu@ciw.edu
lab head
Shouling Xu
contact affiliationCarnegie Institution at Stanford
contact emailsxu@ciw.edu
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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