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PXD030048

PXD030048 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleA MULTI-DIMENSIONAL INTERACTOMICS VIEW ON THE PLANT SNRK1 KINASE COMPLEX REVEALS A KEY REGULATORY ROLE FOR THE CLASS II T6P SYNTHASE-LIKE PROTEINS – part2 TurboID-MS dataset
DescriptionThe plant SNF1-related kinase (SnRK1) plays a central role in energy and metabolic homeostasis. SnRK1 controls growth upon activation by energy-depleting stress conditions, while also monitoring key developmental transitions and nutrient allocation between source and sink tissues. To obtain deeper insight into the SnRK1 complex and its upstream regulatory mechanisms, we explored its protein interaction landscape in a multi-dimensional setting, combining affinity purification, proximity labeling and crosslinking mass spectrometry. Integration of these analyses not only offers a unique view on the composition, stoichiometry and structure of the core heterotrimeric SnRK1 complex but also reveals a myriad of novel robust SnRK1 interactors.
HostingRepositoryPRIDE
AnnounceDate2022-08-30
AnnouncementXMLSubmission_2022-08-30_07:09:12.335.xml
DigitalObjectIdentifierhttps://dx.doi.org/10.6019/PXD030048
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterDominique Eeckhout
SpeciesList scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-11-29 09:48:06ID requested
12022-08-30 07:09:12announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: Arabidopsis, SnRK1 complex, proximity labeling, TurboID
Contact List
Geert De Jaeger
contact affiliationGhent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
contact emailgeert.dejaeger@psb.vib-ugent.be
lab head
Dominique Eeckhout
contact affiliationDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, B-9052, Belgium VIB Center for Plant Systems Biology, Ghent, B-9052, Belgium
contact emailDominique.Eeckhout@psb.ugent.be
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
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