PXD030004

PXD030004 is an original dataset announced via ProteomeXchange.

Title	Metaproteomics of human stool samples for diet assessment
Description	Assessment of diet currently relies on self-reporting, such as food logs, 24 hour recalls and food frequency questionnaires. Self-reporting of diet is inaccurate due to memory lapses, lying and biased language. A molecular-based approach to assess diet would allow accurate reporting of diet for researchers, medical professionals and patients. We performed metaproteomic analysis of 22 human stool samples collected from four individuals enrolled at the Duke Diet and Fitness Center. Samples were collected between 01Aug19 and 22Nov19. All meals at the Duke Diet and Fitness Center were recorded such that the approximate quantities of each food item consumed are known.
HostingRepository	PRIDE
AnnounceDate	2024-12-23
AnnouncementXML	Submission_2024-12-23_06:16:55.272.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alexandria Bartlett
SpeciesList	scientific name: Fungi; NCBI TaxID: 4751; scientific name: Metazoa (Animals); NCBI TaxID: 33208; scientific name: Viridiplantae; NCBI TaxID: 33090; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Bacteria; NCBI TaxID: 2;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-28 05:37:15	ID requested
⏵ 1	2024-12-23 06:16:55	announced

10.1039/D4FO02656J;

submitter keyword: 1D-LC, metaproteome, microbiome, diet, diet prediction, metaproteomics

Manuel Kleiner
contact affiliation	North Carolina State University
contact email	manuel_kleiner@ncsu.edu
lab head
Alexandria Bartlett
contact affiliation	North Carolina State University
contact email	aebartl2@ncsu.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/12/PXD030004

PRIDE project URI

• PRIDE
  1. PXD030004
     1. Label: PRIDE project
     2. Name: Metaproteomics of human stool samples for diet assessment