PXD029993

PXD029993 is an original dataset announced via ProteomeXchange.

Title	Perfluorinated alkyl substances affect the growth, physiology and root proteome of hydroponically grown maize plants
Description	Poly- and perfluorinated alkyl substances (PFAS) are a group of persistent organic pollutants. Plants can accumulate PFAS but their effect on plant physiology at the molecular level is not understood yet. We used hydroponically-grown maize plants treated with a combination of eleven different PFAS (each at 100 µg L-1) to investigate their bioaccumulation and effects on the growth, physiology and their impact on the root proteome. From the root proteome analysis, we identified 75 differentially abundant proteins, mostly involved in cellular metabolic and biosynthetic processes, translation and cytoskeletal reorganization. Results were validated using quantitative real-time PCR and further substantiated using amino acid and fatty acid profiling.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:32:24.063.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Giorgio Arrigoni
SpeciesList	scientific name: Zea mays (Maize); NCBI TaxID: 4577;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-28 03:51:14	ID requested
1	2023-02-08 03:42:06	announced
⏵ 2	2023-11-14 08:32:26	announced	2023-11-14: Updated project metadata.

Ebinezer LB, Battisti I, Sharma N, Ravazzolo L, Ravi L, Trentin AR, Barion G, Panozzo A, Dall'Acqua S, Vamerali T, Quaggiotti S, Arrigoni G, Masi A, Perfluorinated alkyl substances affect the growth, physiology and root proteome of hydroponically grown maize plants. J Hazard Mater, 438():129512(2022) [pubmed]

submitter keyword: PFC

PFAS

quantitative proteomics

TMT

hydroponics

persistent organic pollutants

plants

stress.

Giorgio Arrigoni
contact affiliation	Department of Biomedical Sciences, University of Padova, Italy
contact email	giorgio.arrigonii@unipd.it
lab head
Giorgio Arrigoni
contact affiliation	University of Padova
contact email	giorgio.arrigoni74@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/02/PXD029993

PRIDE project URI

• PRIDE
  1. PXD029993
     1. Label: PRIDE project
     2. Name: Perfluorinated alkyl substances affect the growth, physiology and root proteome of hydroponically grown maize plants