PXD029894 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Molecular mechanisms involved in Atlantic halibut egg quality |
Description | Egg quality is of pivotal importance in biomedicine, agriculture, ecology and environmental science because of its tremendous influence on reproductive success or failure in all animals. Despite species specific differences in physiological aspects of early development, the evolutionary conserved stereotypical procedure of cellular events, led us to investigate whether these findings are common with marine fish species of aquaculture interest. Atlantic halibut (Hippoglossus hippoglossus) is a highly prized species in global fish markets with increasing demand to its production. The objectives of this study were 1) to reveal the proteomic profiles of good versus poor quality halibut eggs, 2) to identify proteins that can serve as egg quality markers, and 3) to discover molecular mechanisms determining egg quality using a combination of quantitative proteomics workflows, tandem mass tags (TMT) labeling and parallel reaction monitoring (PRM). |
HostingRepository | PRIDE |
AnnounceDate | 2022-07-06 |
AnnouncementXML | Submission_2022-07-06_00:57:06.044.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD029894 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | OZLEM YILMAZ |
SpeciesList | scientific name: Hippoglossus hippoglossus; NCBI TaxID: 8267; |
ModificationList | TMT6plex-126 reporter+balance reagent acylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-11-24 05:31:54 | ID requested | |
⏵ 1 | 2022-07-06 00:57:06 | announced | |
2 | 2023-11-14 08:31:41 | announced | 2023-11-14: Updated project metadata. |
Publication List
Keyword List
submitter keyword: Atlantic Halibut, Hippoglossus hippoglossus, Tanmdem mass tags (TMT), Proteome, Proteomics, Egg quality, LC-MSMS |
Contact List
Birgitta Norberg |
contact affiliation | Institute of Marine Research, Austevoll Research Station, 5392, Storebo Norway |
contact email | birgitta.norberg@hi.no |
lab head | |
OZLEM YILMAZ |
contact affiliation | Institute of Marine Research, Norway |
contact email | ozlem.yilmaz@hi.no |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/07/PXD029894 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD029894
- Label: PRIDE project
- Name: Molecular mechanisms involved in Atlantic halibut egg quality