PXD029836

PXD029836 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	dia-PASEF HeLa dilution series 0.2ng - 200ng on Bruker timsTOF Pro 2
Description	Different sample preparation methods were tested for HeLa proteome analysis. A sample obtained using sodium deoxycholate-based lysis allowed identification of the highest number of proteins. For this sample, a dilution series was acquired in triplicates ranging from 0.2ng to 200ng. All measurements were performed on Bruker timsTOF Pro 2 operated in dia-PASEF mode and analysed library-free using DIA-NN 1.8.
HostingRepository	PRIDE
AnnounceDate	2022-06-20
AnnouncementXML	Submission_2022-06-20_05:01:06.813.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vadim Demichev
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Bruker Daltonics timsTOF series

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-20 09:05:07	ID requested
⏵ 1	2022-06-20 05:01:07	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: dia-PASEF diaPASEF DIA-NN HeLa

submitter keyword: dia-PASEF diaPASEF DIA-NN HeLa

Contact List

Markus Ralser
contact affiliation	Charité – Universitätsmedizin Berlin
contact email	markus.ralser@charite.de
lab head
Vadim Demichev
contact affiliation	Charité – Universitätsmedizin Berlin
contact email	vadim.demichev@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD029836
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/06/PXD029836

PRIDE project URI

Repository Record List

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