PXD029757

PXD029757 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic changes associated with predator induced morphological defenses in Olympia oysters
Description	Samples were collected and experiments performed by the laboratories of Tyler Evans and Eric Sanford. Samples represent a single biological replicate processed using an identical procedure, i.e., reduction/ alkylation and trypsin digestion as described in a previously published protocol (https://doi.org/10.1074/mcp.M113.029827). Data for each sample were acquired using regular bottom-up DDA proteomics. Biological mass spectrometry was performed and data analyzed using a workflow consisting of Compass Hystar 4.1, DataAnalysis 4.4, PEAKS Studio 8.5, Mascot 2.2.7, X!Tandem Alanine, and Scaffold 4.8 in the Kültz laboratory.
HostingRepository	MassIVE
AnnounceDate	2021-11-15
AnnouncementXML	Submission_2021-11-15_21:40:28.638.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Dietmar Kultz
SpeciesList	scientific name: Ostrea lurida; NCBI TaxID: 627230;
ModificationList	Acetyl; Carbamidomethyl; Carbamyl; Methyl; Dehydrated; Oxidation; Phospho
Instrument	impact HD

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-11-15 19:27:03	ID requested
⏵ 1	2021-11-15 21:40:28	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Ecological proteomics, Field samples, Oyster, Environmental adaptation, Stress, Larvae

submitter keyword: Ecological proteomics, Field samples, Oyster, Environmental adaptation, Stress, Larvae

Contact List

Tyler Evans
contact affiliation	California State University East Bay, Hayward
contact email	tyler.evans@csueastbay.edu
lab head
Dietmar Kueltz
contact affiliation	University of California, Davis
contact email	dkueltz@ucdavis.edu
lab head
Dietmar Kultz
contact affiliation	University of California, Davis
contact email	dkueltz@ucdavis.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000088386/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000088386/