PXD029377

PXD029377 is an original dataset announced via ProteomeXchange.

Title	Intracellular and extracellular proteome characterization of virulent and avirulent Bursaphelenchus xylophilus isolates
Description	The pinewood nematode (PWN), Bursaphelenchus xylophilu (Bx) s, one of the most serious forest pests, worldwide, is considered the causal agent of the pine wilt disease (PWD). The main host species belong to the genus Pinus and a variation in the susceptibility of several pine species to PWN infection is well-known. Additionally, it is also recognized that there is variation in the virulence among different B. xylophilus isolates. In the present study, we applied a quantitative mass spectrometry-based proteomics approach to perform a deep characterization of proteomic changes across two B. xylophilus isolates from different hosts and geographical origins and with different virulence. A total of 1456 proteins were quantified and compared between the two isolates secretomes and a total of 2741 proteins were quantified and compared between the nematode proteomes in two different conditions, pine tree extract and fungus stimuli.
HostingRepository	PRIDE
AnnounceDate	2023-05-26
AnnouncementXML	Submission_2023-05-26_06:20:28.512.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	SandraAnjo
SpeciesList	scientific name: cellular organisms; NCBI TaxID: NCBITaxon:131567; scientific name: Bursaphelenchus xylophilus (Pinewood nematode worm) (Aphelenchoides xylophilus); NCBI TaxID: 6326;
ModificationList	S-carboxamidoethyl-L-cysteine
Instrument	TripleTOF 6600

Revision	Datetime	Status	ChangeLog Entry
0	2021-10-27 08:13:08	ID requested
1	2022-01-13 02:32:42	announced
⏵ 2	2023-05-26 06:20:29	announced	2023-05-26: Updated project metadata.

Cardoso JMS, Anjo SI, Manadas B, Silva H, Abrantes I, Nakamura K, Fonseca L, : A Proteomic Approach. Front Plant Sci, 12():822289(2021) [pubmed]

submitter keyword: proteomics,Intracellular proteome

extracellular proteome

Bursaphelenchus xylophilus, avirulent isolate, virulent isolate, pinewood nematode

JoanaSá
contact affiliation	Centre for Functional Ecology, University of Coimbra
contact email	joana.cardoso@uc.pt
lab head
SandraAnjo
contact affiliation	​Center for Neuroscience and Cell Biology – University of Coimbra
contact email	sandra.isabel.anjo@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD029377

PRIDE project URI

• PRIDE
  1. PXD029377
     1. Label: PRIDE project
     2. Name: Intracellular and extracellular proteome characterization of virulent and avirulent Bursaphelenchus xylophilus isolates