PXD029300 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Detection of mutated peptides of SARS-CoV-2 from COVID-19-infected patients |
Description | This project involves the identification of mutated peptides from swab and plasma samples using an in-house developed Mutant Peptide Database (MPD) |
HostingRepository | PRIDE |
AnnounceDate | 2023-11-14 |
AnnouncementXML | Submission_2023-11-14_08:47:48.270.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Abhilash Barpanda |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2021-10-22 06:58:10 | ID requested | |
1 | 2023-05-10 15:09:39 | announced | |
⏵ 2 | 2023-11-14 08:47:55 | announced | 2023-11-14: Updated project metadata. |
Publication List
Rajoria S, Halder A, Tarnekar I, Pal P, Bansal P, Srivastava S, Detection of Mutant Peptides of SARS-CoV-2 Variants by LC/MS in the DDA Approach Using an In-House Database. J Proteome Res, 22(6):1816-1827(2023) [pubmed] |
Keyword List
submitter keyword: SARS-CoV-2, Mass spectrometry, Mutant peptides, COVID-19 |
Contact List
Sanjeeva Srivastava |
contact affiliation | Indian Institute of Technology, Bombay |
contact email | sanjeeva@iitb.ac.in |
lab head | |
Abhilash Barpanda |
contact affiliation | IIT Bombay |
contact email | avilash94@iitb.ac.in |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/05/PXD029300 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD029300
- Label: PRIDE project
- Name: Detection of mutated peptides of SARS-CoV-2 from COVID-19-infected patients