PXD029246

PXD029246 is an original dataset announced via ProteomeXchange.

Title	Identification of the cell cycle specific proximal interactors of PCDH7
Description	We used proximity dependent biotin identification (BioID) method to determine cell cycle specific interaction partners of PCDH7. HeLa S3 cells were synchronized to interphase and mitosis using double tymidine block and double thymidine block followed by S-Trityl-L-cysteine (STC) treatment respectively. Candidate interactors were isolated using streptavidin affinity purification and identified using LC-MS/MS analysis.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_07:33:35.725.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Altuğ Kamacıoğlu
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2021-10-20 08:12:53	ID requested
1	2023-02-27 09:05:26	announced
⏵ 2	2023-11-14 07:33:36	announced	2023-11-14: Updated project metadata.

Ozkan NE, Yigit BN, Degirmenci BS, Qureshi MH, Yapici GN, Kamac, ı, oglu A, Bavili N, Kiraz A, Ozlu N, Cell cycle-dependent palmitoylation of protocadherin 7 by ZDHHC5 promotes successful cytokinesis. J Cell Sci, 136(6):(2023) [pubmed]

submitter keyword: PCDH7, mitosis, HeLa,Homo sapiens, cell cycle, BioID, protocadherin

Nurhan Ozlu
contact affiliation	Department of Molecular Biology and Genetics, Koc University, Istanbul, Turkey School of Medicine, Koc University, 34450 Istanbul, Turkey Koc University Research Center for Translational Medicine (KUTTAM), 34450 Istanbul, Turkey
contact email	nozlu@ku.edu.tr
lab head
Altuğ Kamacıoğlu
contact affiliation	Koç University
contact email	akamacioglu18@ku.edu.tr
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2023/02/PXD029246

PRIDE project URI

• PRIDE
  1. PXD029246
     1. Label: PRIDE project
     2. Name: Identification of the cell cycle specific proximal interactors of PCDH7