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PXD029036

PXD029036 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleResponse of Haloferax volcanii to low-iron stress
DescriptionWe analyzed the response of the haloarchaeal model organism Haloferax volcanii to low iron stress on the proteome level by label-free mass spectrometry. Cells grown in minimal medium with normal iron levels were compared to those grown under low iron conditions. We separated the samples into soluble and membrane fraction to focus specifically on import/export processes which are frequently associated with metal uptake. Using a comprehensive annotated spectral library and data-independent acquisition mass spectrometry, we identified significant changes to both the membrane and the soluble proteomes of Haloferax volcanii under iron starvation.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_06:52:24.834.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterChristof Lenz
SpeciesList scientific name: Haloferax volcanii (Halobacterium volcanii); NCBI TaxID: 2246;
ModificationListNo PTMs are included in the dataset
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-10-10 23:13:47ID requested
12024-08-04 03:24:05announced
22024-10-22 06:52:25announced2024-10-22: Updated project metadata.
Publication List
10.3389/FMICB.2024.1422844;
Keyword List
submitter keyword: Haloferax volcanii, proteome analysis, stress response, iron deficiency, data-independent acquisition mass spectrometry
Contact List
Christof Lenz
contact affiliationCore Facility Proteomics, Institute of Clinical Chemistry, University Medical Center Goettingen, Germany
contact emailchristof.lenz@med.uni-goettingen.de
lab head
Christof Lenz
contact affiliationMax Planck Institute for Biophysical Chemistry
contact emailchristof.lenz@mpibpc.mpg.de
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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