PXD028857

PXD028857 is an original dataset announced via ProteomeXchange.

Title	Evaluate gut microbiome biobanking
Description	A rapid ex vivo microbiome assay and metaproteomics approach was used for rapid evaluation of the cultivability of bio-banked live microbiota, which shows minimal detrimental influences of long-term freezing in deoxygenated glycerol buffer on the cultivability of fecal microbiota.
HostingRepository	PRIDE
AnnounceDate	2022-02-17
AnnouncementXML	Submission_2022-02-16_16:24:38.846.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xu Zhang
SpeciesList	scientific name: human gut metagenome; NCBI TaxID: 408170;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2021-09-29 14:17:49	ID requested
⏵ 1	2022-02-16 16:24:39	announced

Zhang X, Walker K, Mayne J, Li L, Ning Z, Stintzi A, Figeys D, microbiome assay and metaproteomics. Gut Microbes, 14(1):2035658(2022) [pubmed]

submitter keyword: microbiome, biobanking, metaproteomics, freezing

Daniel Figeys
contact affiliation	University of Ottawa
contact email	dfigeys@uottawa.ca
lab head
Xu Zhang
contact affiliation	University of Ottawa
contact email	cheuzhang@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/02/PXD028857

PRIDE project URI

• PRIDE
  1. PXD028857
     1. Label: PRIDE project
     2. Name: Evaluate gut microbiome biobanking