PXD028782

PXD028782 is an original dataset announced via ProteomeXchange.

Title	Detergent-resistant membranes in Agrobacterium tumefaciens
Description	We established a protocol for the biochemical fractionation of Agrobacterium tumefaciens membranes, and characterized the proteome of detergent-sensitive and detergent-resistant membrane fractions by mass spectrometry. We found that well-established microdomain marker proteins co-purify with proteins associated with transport or secretion processes in the detergent-resistant fraction, suggesting a functional micro-compartmentalization of the Gram-negative membrane. The presence of components of virulence-associated secretion systems in detergent-resistant membranes supports the involvement of bacterial microdomains in host-microbe interaction and microbial competition.
HostingRepository	PRIDE
AnnounceDate	2021-11-03
AnnouncementXML	Submission_2021-11-03_06:05:16.335.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Simon Czolkoss
SpeciesList	scientific name: Agrobacterium fabrum str. C58; NCBI TaxID: 176299;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2021-09-27 03:45:43	ID requested
⏵ 1	2021-11-03 06:05:16	announced

Dataset with its publication pending

submitter keyword: Agrobacterium, Membrane organization, DRM

Franz Narberhaus
contact affiliation	Biologie der Mikroorganismen Ruhr-Universität Bochum
contact email	franz.narberhaus@rub.de
lab head
Simon Czolkoss
contact affiliation	Ruhr University Bochum
contact email	simon.czolkoss@rub.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD028782

PRIDE project URI

• PRIDE
  1. PXD028782
     1. Label: PRIDE project
     2. Name: Detergent-resistant membranes in Agrobacterium tumefaciens