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PXD028709

PXD028709 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMapping the Melanoma Plasma Proteome (MPP) using Single-Shot Proteomics and Custom Protein Databases
DescriptionWe mapped the Melanoma Plasma Proteome (MPP) of undepleted samples a new strategy for protein identification refered here as Wise MS transfer (WiMT). We were able to identify more than 1,000 protein in undepleted plasma samples which shows a deep coverage of the plasma proteome. The MPP of undeplted samples was well characterized showing a great potential for large-scale screening of melanoma proteomics studies and other neoplastic diseases.
HostingRepositoryPRIDE
AnnounceDate2021-12-27
AnnouncementXMLSubmission_2021-12-27_12:01:40.156.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterNatália Almeida
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive HF-X
Dataset History
RevisionDatetimeStatusChangeLog Entry
02021-09-22 12:36:48ID requested
12021-12-27 12:01:40announced
Publication List
10.3390/CANCERS13246224;
Keyword List
submitter keyword: Malignant Melanoma
Plasma
Proteome
Proteomics
Biomarkers
WiMT
Contact List
György Marko-Varga
contact affiliationClinical Protein Science & Imaging, Biomedical Centre, Department of Biomedical Engineering, Lerund University, Lund, Sweden Chemical Genomics Global Research Lab, Department of Biotechnology, College of Life Science and Biotechnology, Yonsei University, Seoul,Republic of Korea Department of Surgery, Tokyo Medical University, Tokyo, Japan
contact emailgyorgy.marko-varga@bme.lth.se
lab head
Natália Almeida
contact affiliationLaboratory of Proteomics/LADETEC, Universidade Federal Do Rio de Janeiro, Rio de Janeiro, 21941-598, Brazil Proteomics Unit, Institute of Chemistry, Universidade Federal Do Rio de Janeiro, Rio de Janeiro, 21941-909, Brazil Clinical Protein Science & Imaging, Biomedical Center, Department of Biomedical Engineering, Lund University, Lund, BMC D13, 22184, Swede
contact emailnatalia1almeida@hotmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
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