PXD028578

PXD028578 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Stable isotope probing with 13C-labeled bicarbonate/proteomics of cyanobacterial consortium collected from photobioreactors enriched from soda lake microbial mats in BC, Canada
Description	In this work we used stable isotope probing/proteomics to study uptake of carbon sources by members of the cyanobacterial consortium. The database for protein identification was obtained from assembled metagenomes.
HostingRepository	PRIDE
AnnounceDate	2022-01-21
AnnouncementXML	Submission_2022-01-21_13:27:32.470.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Angela Kouris
SpeciesList	scientific name: Phormidium sp. OSCR; NCBI TaxID: 1666905;
ModificationList	acetylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-09-16 08:59:36	ID requested
⏵ 1	2022-01-21 13:27:32	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: cyanobacteria, heterotrophs, stable isotope probing

submitter keyword: cyanobacteria, heterotrophs, stable isotope probing

Contact List

Marc Strous
contact affiliation	Energy Bioengineering and Geomicrobiology Group, Department of Geoscience, University of Calgary
contact email	mstrous@ucalgary.ca
lab head
Angela Kouris
contact affiliation	University of Calgary
contact email	angela.kouris@ucalgary.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD028578
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/01/PXD028578

PRIDE project URI

Repository Record List

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