PXD027917

PXD027917 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A proximity interactome map of the VAC14-FIG4 complex using BioID
Description	Conversion between phosphatidylinositol-3-phosphate and phosphatidylinositol-3,5-bisphosphate on endosomal membranes is critical for maturation of early endosomes to late endosomes/lysosomes, and is regulated by the PIKfyve-Vac14-Fig4 complex. In this study, we screened for the cellular interactome of Vac14 and Fig4 using proximity-dependent biotin labelling (BioID) in 293T cells.
HostingRepository	PRIDE
AnnounceDate	2021-11-03
AnnouncementXML	Submission_2021-11-03_04:41:16.982.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD027917
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Shirley Qiu
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	biotinylated residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-08-13 03:02:11	ID requested
⏵ 1	2021-11-03 04:41:17	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: VAC14, FIG4, PIKfyve, BioID, protein-protein interactions, AP-MS, LC-MS/MS

submitter keyword: VAC14, FIG4, PIKfyve, BioID, protein-protein interactions, AP-MS, LC-MS/MS

Contact List

Dr. Marceline Côté
contact affiliation	Department of Biochemistry, Microbiology and Immunology University of Ottawa, Ottawa, Canada
contact email	marceline.cote@uottawa.ca
lab head
Shirley Qiu
contact affiliation	University of Ottawa
contact email	sqiu096@uottawa.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD027917
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/11/PXD027917

PRIDE project URI

Repository Record List

[ + ]