PXD027898

PXD027898 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Effect of control siRNA knockdown on EndoC-bH1 cell lysate proteome (pilot TMT experiment)
Description	EndoC-bH1 cells proteomics was assessed in untreated baseline condition and after treatment with control siRNA at 24, 48 and 72 hours. Unpowered exploratory experiment. Sample size: triplicate per condition.
HostingRepository	PRIDE
AnnounceDate	2024-08-27
AnnouncementXML	Submission_2024-08-27_03:51:52.851.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Maria Ryaboshapkina
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2021-08-12 08:02:10	ID requested
1	2022-04-07 04:24:38	announced
⏵ 2	2024-08-27 03:51:53	announced	2024-08-27: Updated project metadata.

Publication List

10.1016/j.mcpro.2022.100229;
Ryaboshapkina M, Saitoski K, Hamza GM, Jarnuczak AF, Pechberty S, Berthault C, Sengupta K, Underwood CR, Andersson S, Scharfmann R, H1. Mol Cell Proteomics, 21(5):100229(2022) [pubmed]

10.1016/j.mcpro.2022.100229;

Ryaboshapkina M, Saitoski K, Hamza GM, Jarnuczak AF, Pechberty S, Berthault C, Sengupta K, Underwood CR, Andersson S, Scharfmann R, H1. Mol Cell Proteomics, 21(5):100229(2022) [pubmed]

Keyword List

submitter keyword: Human, EndoC-bH1

submitter keyword: Human, EndoC-bH1

Contact List

Raphael Scharfmann
contact affiliation	Université de Paris, Institut Cochin, INSERM U1016, CNRS UMR 8104, 75014 Paris, France.
contact email	raphael.scharfmann@inserm.fr
lab head
Maria Ryaboshapkina
contact affiliation	AstraZeneca
contact email	maria.ryaboshapkina@astrazeneca.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD027898
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/04/PXD027898

PRIDE project URI

Repository Record List

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